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{bio}[foss/2022a] Omnipose v0.4.4 #18402

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merged 9 commits into from
Aug 22, 2023
Merged

{bio}[foss/2022a] Omnipose v0.4.4 #18402

merged 9 commits into from
Aug 22, 2023

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deniskristak
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@deniskristak deniskristak commented Jul 27, 2023 •
edited by boegel
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adding easyconfigs: mahotas-1.4.13-foss-2022a.eb, mgen-1.2.1-foss-2022a.eb, ncolor-1.2.1-foss-2022a.eb, peakdetect-1.2-foss-2022a.eb, torchvf-0.1.3-foss-2022a.eb, omnipose-0.4.4-foss-2022a.eb

requires:

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adding easyconfigs: mahotas-1.4.13-foss-2022a.eb, mgen-1.2.1-foss-202…
92c2133 
…2a.eb, ncolor-1.2.1-foss-2022a.eb, peakdetect-1.2-foss-2022a.eb, torchvf-0.1.3-foss-2022a.eb
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adding main thing - omnipose
41bc2f7
@deniskristak deniskristak changed the title omnipose {bio}[foss/2022a] omnipose v0.4.4 Jul 27, 2023
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#18251 needs to be merged first

@boegel boegel added this to the 4.x milestone Aug 4, 2023
@easybuilders easybuilders deleted a comment from boegelbot Aug 17, 2023
@easybuilders easybuilders deleted a comment from boegelbot Aug 17, 2023
@boegel boegel added the update label Aug 17, 2023
@boegel boegel changed the title {bio}[foss/2022a] omnipose v0.4.4 {bio}[foss/2022a] Omnipose v0.4.4 Aug 17, 2023
@easybuilders easybuilders deleted a comment from boegelbot Aug 17, 2023
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boegel commented Aug 17, 2023

@boegelbot please test @ generoso

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@boegel: Request for testing this PR well received on login1

PR test command 'EB_PR=18402 EB_ARGS= EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_18402 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 11492

Test results coming soon (I hope)...

- notification for comment with ID 1682004697 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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Test report by @boegelbot
SUCCESS
Build succeeded for 6 out of 6 (6 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/1c45699ae277f4c176bf0e5990ffdf80 for a full test report.

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boegel commented Aug 22, 2023

@boegelbot please test @ jsc-zen2

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@boegel: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=18402 EB_ARGS= /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_18402 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 3211

Test results coming soon (I hope)...

- notification for comment with ID 1687946136 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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Test report by @boegelbot
SUCCESS
Build succeeded for 6 out of 6 (6 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/bbb6c5e85d4f70e3c3deab7916a5ede1 for a full test report.

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boegel commented Aug 22, 2023

Test report by @boegel
SUCCESS
Build succeeded for 6 out of 6 (6 easyconfigs in total)
node3104.skitty.os - Linux RHEL 8.6, x86_64, Intel(R) Xeon(R) Gold 6140 CPU @ 2.30GHz (skylake_avx512), Python 3.6.8
See https://gist.github.com/boegel/1617232e150acdb1842c9a9b102808c7 for a full test report.

@boegel boegel modified the milestones: 4.x, next release (4.8.1?) Aug 22, 2023
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boegel approved these changes Aug 22, 2023
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lgtm

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boegel commented Aug 22, 2023

Going in, thanks @deniskristak!

@boegel boegel merged commit c0b67fe into easybuilders:develop Aug 22, 2023
@boegel boegel mentioned this pull request Aug 22, 2023
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